Publications

About LATE-PCR

  1. Pierce, K.E. and Wangh, L.J. (2007) "LATE-PCR and allied technologies: Real-time detection strategies for rapid, reliable diagnosis from single cells." In: Single Cell Diagnostics, Methods in Molecular Medicine Series (ed. Alan Thornhill), Series Editor John Walker, Humana Press, UK. LATE-PCR and allied technologies: Real-time detection strategies for rapid, reliable diagnosis from single cells


  2. Sanchez, J. A., Abramowitz, J.D., Salk, J.J., Reis, Jr, A.H., Rice, J.E., Pierce, K.E., and Wangh, L.J. (2006) Two-temperature LATE-PCR endpoint genotyping, BMC Biotechnology, 6:44. Two-temperature LATE-PCR endpoint genotyping


  3. Salk, J.J., Sanchez, J.A., Pierce, K.E., Rice, J.E., Soares, K.C., and Wangh, L.J. (2006) Direct amplification of single-stranded DNA for pyrosequencing using Linear-After-The-Exponential (LATE)-PCR, Analytical Biochemistry, 353:124-132. Direct amplification of single-stranded DNA for pyrosequencing using Linear-After-The-Exponential (LATE)-PCR


  4. Pierce, K.E., Sanchez, J.A., Rice, J.E., and Wangh, L.J. (2005) Linear-After-The-Exponential (LATE)-PCR: Primer design criteria for high yields of specific single-stranded DNA and improved real-time detection, Proc Natl Acad Sci USA, 102:8609-8614. Linear-After-The-Exponential (LATE)-PCR: Primer design criteria for high yields of specific single-stranded DNA and improved real-time detection


  5. Sanchez, J.A., Pierce, K.E., Rice, J.E., and Wangh, L.J. (2004) Linear-After-The-Exponential (LATE)-PCR: An advanced method of asymmetric PCR and its uses in quantitative real-time analysis, Proc Natl Acad Sci USA, 101(7):1933-1938. Linear-After-The-Exponential (LATE)-PCR: An advanced method of asymmetric PCR and its uses in quantitative real-time analysis


  6. Pierce, K.E., Rice, J.E., Sanchez, J.A., and Wangh, L.J. (2003) Detection of cystic fibrosis alleles from single cells using molecular beacons and a novel method of asymmetric real-time PCR, Molecular Human Reproduction, 9(12):815-820. Detection of cystic fibrosis alleles from single cells using molecular beacons and a novel method of asymmetric real-time PCR


  7. Rice, J.E., Sanchesz, J.A., Pierce, K.E., Reis, A.H., Osborne, A., and Wangh, L.J. (2007) Monoplex/multiplex linear-after-the-exponential-PCR assays combined with PrimeSafe and Dilute-'N'-Go sequencing, Nature Protocols, 2(10): 2429-2438. Detection of cystic fibrosis alleles from single cells using molecular beacons and a novel method of asymmetric real-time PCR

 About RT-LATE-PCR

  1. Hartshorn C, Wangh LJ.   One-step RT-LATE-PCR for mRNA and viral RNA detection and quantification. RT-PCR Protocols: Second Edition, Methods in Molecular Biology series, The Humana Press Inc., In press


  2. Hartshorn, C., Eckert, J.J., Hartung, O., and Wangh, L.J. (2007) Single-cell duplex RT-LATE-PCR reveals Oct4 and Xist RNA gradients in 8-cell embryos, BMC Biotechnology, 7:87. Developmentally-regulated changes of Xist RNA levels in single preimplantation mouse embryos, as revealed by quantitative real-time PCR

 

About PurAmp and its uses

  1. Hartshorn, C., Anshelevich, A., Jia, Y., and Wangh, L.J. (2007) Early Onset of Heat-Shock Response in Mouse Embryos Revealed by Quantification of Stress-Inducible hsp70i RNA, Gene Regulation and Systems Biolgy, 1: 1-9. Developmentally-regulated changes of Xist RNA levels in single preimplantation mouse embryos, as revealed by quantitative real-time PCR


  2. Hartshorn, C., Anshelevich, A., and Wangh, L.J. (2005) Laser zona-drilling does not induce hsp70i transcription in blastomeres of 8-cell mouse embryos, Fertility and Sterility, 84(5):1547-1550. Laser zona-drilling does not induce hsp70i transcription in blastomeres of 8-cell mouse embryos


  3. Hartshorn, C., Anshelevich, A., and Wangh, L.J. (2005) Rapid, single-tube method for quantitative preparation and analysis of RNA and DNA in samples as small as one cell, BMC Biotechnology, 5:2. Rapid, single-tube method for quantitative preparation and analysis of RNA and DNA in samples as small as one cell

 

About mouse embryos

  1. Hartshorn, C., Rice, J.E., and Wangh, L.J. (2004) Optimized real-time RT-PCR for quantitative measurements of DNA and RNA in single embryos and blastomeres, A-Z of Quantitative PCR, IUL Biotechnology Series, 5 (ed. S.A. Bustin), La Jolla: International University Line; 675-702. Optimized real-time RT-PCR for quantitative measurements of DNA and RNA in single embryos and blastomeres


  2. Hartshorn, C., Rice, J.E., and Wangh, L.J. (2003) Differential pattern of Xist RNA accumulation in single blastomeres isolated from 8-cell stage mouse embryos following laser zona drilling,  Molecular Reproduction and Development, 64:41-51. Differential pattern of Xist RNA accumulation in single blastomeres isolated from 8-cell stage mouse embryos following laser zona drilling


  3. Hartshorn, C., Rice, J.E., and Wangh, L.J. (2002) Developmentally-regulated changes of Xist RNA levels in single preimplantation mouse embryos, as revealed by quantitative real-time PCR,  Molecular Reproduction and Development; 61:425-436. Developmentally-regulated changes of Xist RNA levels in single preimplantation mouse embryos, as revealed by quantitative real-time PCR

Mitochondrial Diagnostics

  1. Osborne, A., Reis, A.H., Bach, L., Wangh, L. (2009) Single-Molecule LATE-PCR Analysis of Human Mitochondrial Genomic Sequence Variations, PLoS ONE 4(5). Effectiveness and limitations of uracil-DNA glycosylases in sensitive real-time PCR assays



About single cell genomics using conventional PCR

  1. Pierce, K.E., and Wangh, L.J. (2004) Effectiveness and limitations of uracil-DNA glycosylases in sensitive real-time PCR assays, BioTechniques 36(1): 44-48. Effectiveness and limitations of uracil-DNA glycosylases in sensitive real-time PCR assays


  2. Rice, J.E., Sanchez, J.A., Pierce, K.E., and Wangh, L.J. (2002) Real-time PCR with molecular beacons provides a highly accurate assay for detection of Tay-Sachs alleles in single cells, Prenatal Diagnosis, 22:1130-1134. Real-time PCR with molecular beacons provides a highly accurate assay for detection of Tay-Sachs alleles in single cells


  3. Pierce, K., Rice, J.E., Sanchez, J.A., and Wangh, L.J. (2002) QuantiLyse: Reliable DNA amplification from single cells, BioTechniques 32(5):1106-1111. QuantiLyse: Reliable DNA amplification from single cells


  4. Pierce, K.E., Rice, J.E., Sanchez, J.A., Brenner, C., and Wangh, L.J. (2000) Real-time PCR using molecular beacons for accurate detection of the Y chromosome in single human blastomeres, Molecular Human Genetics, 6(12):1155-1164. Real-time PCR using molecular beacons for accurate detection of the Y chromosome in single human blastomeres


  5. Pierce, K.E., and Wangh, L.J. Linear-After-The-Exponential Polymerase Chain Reaction and Allied Technologies, Methods in Molecular Medicine: Single Cell Diagnostics: Methods and Protocols 7:65-85. Real-time PCR using molecular beacons for accurate detection of the Y chromosome in single human blastomeres


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