Complete List of Publications


Complete List of Publications

Recent Publications


2012

  • T. Gibaud, E. Barry, M. Zakhary, A. Ward, C. Berciu, Y. Yang, M.F. Hagan, R. Oldenbourg, D. Nicastro, R. Meyer, Z. Dogic. “Reconfigurable self-assembly through chiral control of interfacial tension”, Nature, 2012  (in press) [PDF] [Supp]
  • McCandlish, S.R, Baskaran, A.,and Hagan, M.F.. “Spontaneous Segregation of Self-Propelled Particles with Different Motilities”, Soft Matter, 8, 2527 (2012) arXiv:1110.2479 [PDF] [Supp]
  • Patel, A.J; Varilly, P.; Jamadagni, S.N.; Hagan, M.F.; Chandler, D.; and Garde, S. "Sitting at the edge: How biomolecules use hydrophobicity to tune their interactions and function" J. Phys. Chem. B (in press) [PDF]

  • Yang Y., Barry E., Dogic Z. and Hagan, M.F. "Self-assembly of 2D membranes from mixtures of hard rods and depleting polymers", Soft Matter, 8, 707 (2012), arXiv:1103.2760 [PDF] [Supp]

  • Gopinath, A., Hagan, M.F., Marchetti, M.C., Baskaran, A. “Dynamical Self-regulation in Self-propelled Particle Flows” submitted to Phys. Rev. E, arXiv:1112.6011

2011

  • Giomi L., Mahadevan L., Chakraborty, B., and Hagan, M.F. “Banding, excitability and chaos in active nematic suspensions”, arXiv:1110.4338 (2011) [PDF]
  • Yang, Y., and Hagan, M.F. "Theoretical calculation of the phase behavior of colloidal membranes" Phys. Rev. E, 84, 051402 (2011) [PDF]

  • Hagan, M.F., Elrad O.M., and Jack R.L. "Mechanisms of kinetic trapping in self-assembly and phase transformation", J.Chem. Phys, 135, 104115 (2011) [PDF]

  • Giomi L., Mahadevan L., Chakraborty, B., and Hagan, M.F. “Excitable Patterns in Active Nematics”,  Phys. Rev. Lett 106,21801 (2011)  [PDF]

  • Sumedha; Hagan, M.F.; Chakraborty, B. "Prolonging assembly through dissociation: A self-assembly paradigm in microtubules", Phys. Rev. E, 83, 051904 (2011) [PDF]

2010

  • [invited] Elrad, O.M.; Hagan, M.F.  "Encapsulation of a Polymer by an Icosahedral Virus", Phys. Biol., 7, 045003 (2010), Part of a special focus issue on the physical virology.  [PDF]

  • Kivenson, A.; Hagan, M.F. "Mechanisms of Capsid Assembly around a Polymer",  Biophys. J, 2010, 99, 619-628 PDF [Supp]

  • Yang, Y.; Meyer, R.B.; Hagan, M.F. "Self-limited self-assembly of chiral filaments", Phys. Rev. Lett., 2010,104, 258102 PDF

  • Hagan, M.F.; Elrad, O.M. “Understanding the Concentration Dependence of Viral Capsid Assembly Kinetics - the Origin of the Lag Time and Identifying the Critical Nucleus Size”,  Biophys. J., 2010, 98, 1065 - 1074 PDF [Supp]

2009

  • Hagan, M.F. “A theory for viral capsid assembly around electrostatic cores”,  J. Chem. Phys., 2009, 130, 114902 PDF

  • Huang, F.; Addas, K.; Ward, A ; Flynn, N.T.; Hagan, M.F.; Dogic, Z.;  Fraden, S. “The pair potential of colloidal stars”,  Phys. Rev. Lett., 2009, 102, 108302 PDF

  • Whitelam, S.; Feng, E.H.; Hagan, M.F.; Geissler, P.G. “The role of collective motion in examples of coarsening and self-assembly”,  Soft Matter, 2009, 6, 1251-1262  PDF

2008

Through 2007

  • Jack, R. L.; Hagan, M. F.; Chandler, D. “Fluctuation-dissipation ratios in the dynamics of self-assembly”, Phys. Rev. E, 2007, 76, 021119 PDF 

  • Hagan, M. F.; Chandler, D. “Dynamic Pathways for Viral Capsid Assembly”, Biophys. J., 2006, 91,42 PDF

  • Hagan, M. F.; Chakraborty, A. K. “Hybridization Dynamics of Surface Immobilized DNA”, J. Chem. Phys., 2004, 120, 4958 PDF

  • Hagan, M. F.; Dinner, A. R.; Chandler, D.; Chakraborty, A. K.  “Atomistic Understanding of Kinetic Pathways for Single Base-Pair Binding and Unbinding in DNA”, Proc. Natl. Acad. Sci. USA, 2003, 100, 13922  PDF

  • Hagan, M. F.; Majumdar, A.; Chakraborty, A. K. “Nanomechanical Forces Generated by Surface Grafted DNA”, J. Phys. Chem. B, 2002, 106, 10163  PDF

  • Wu, G.; Haifeng, J.; Hansen, K.; Thundat, T.; Datar, R.; Cote, R.; Hagan, M. F.; Chakraborty, A. K.; Majumdar, A. “Origin of Nanomechanical Cantilever Motion Generated from Biomolecular Interactions”, Proc. Natl. Acad. Sci. USA, 2001, 98, 1560. PDF